墾丁國家公園的籬枝同孔珊瑚宿主遺傳結構與共生藻群聚之時空變異

方慧玲

doi:10.6342/NTU201603599

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垦丁国家公园的篱枝同孔珊瑚宿主遗传结构与共生藻群聚之时空变异

Spatial and temporal variations of host genetic structure and symbiont community in the catch bowl coral, Isopora palifera (Scleractinia; Acroporidae), in the Kenting National Park, Taiwan

方慧玲 , 硕士　　导师：陈昭伦　　共同指导教授：单伟弥

英文 DOI： 10.6342/NTU201603599

篱枝同孔珊瑚；共生藻；热逆境；微卫星；族群分化；热驯化； Isopora palifera ； Symbiodinium ； thermal stress ； microsatellites ； population subdivision ； acclimatization

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摘要 │ 参考文献 (73) │ 国际计量

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Global coral reefs are suffering from anthropogenic impacts and warming seawater temperature caused by climate change. Proper management strategies and rich knowledge of their thermal tolerance mechanisms are essential in order to protect the declining coral reefs. In this research, spatial and temporal variations of coral host population genetic structure and the associated Symbiodinium community structure of Isopora palifera in Kenting National Park, southern Taiwan, were studied. In 2015, a total of 368 colonies of I. palifera were collected from 11 sites covering the entire coastal reefs in Kenting National Park. Six novel microsatellite markers were used to reveal the population genetic structure of coral host. Restriction fragment length polymorphisms (RFLPs), denaturing gradient gel electrophoresis (DGGE), and DNA sequencing of ribosomal gene regions were used to identify the spatial and temporal variations of Symbiodinium types. In host samples, low genetic diversity and connectivity of I. palifera populations were found. Population subdivision was observed in 11 populations, which were subdivided into two discrete clusters. Symbiodinium hosted by I. palifera predominantly belonged to ITS2 rDNA type C3 and D1-1a, its spatial pattern was significantly correlated to seawater temperature, with the thermal-tolerant type D1-1a Symbiodinium dominated in I. palifera colonies located at the reef adjacent to the Outlet of 3rd Nuclear Power Plant and thermal-sensitive Symbiodinium C3 gradually increased in locations away from the Outlet. Comparing the samples at Tantzei Bay (TZB) collected in 2000, 2006, 2009 and 2015, the host genetic structure remained the same, while Symbiodinium community structure fluctuated through time. Combining the results of the spatial and temporal variations of both coral host genetic structure and Symbiodinium community structure, it is showed that facing the heat stress caused by thermal effluent from the 3rd Nuclear Power Plant, Isopora palifera host did not develop genetic adaptation, while symbiont shuffling was the major mechanism for Isopora palifera in Kenting National Park to survive this thermal stress.

参考文献 ( 73 ) 〈TOP〉

Aljanabi, S. M., & Martinez, I. (1997). Universal and rapid salt-extraction of high quality genomic DNA for PCR-based techniques. Nucleic acids research, 25(22), 4692-4693.
连结：
Allemand, D., Ferrier-Pagès, C., Furla, P., Houlbrèque, F., Puverel, S., Reynaud, S., Tambutté, É., Tambutté, S. & Zoccola, D. (2004). Biomineralisation in reef-building corals: from molecular mechanisms to environmental control. Comptes Rendus Palevol,3(6), 453-467.
连结：
Baker, A. C. (2003). Flexibility and specificity in coral-algal symbiosis: diversity, ecology, and biogeography of Symbiodinium. Annual Review of Ecology, Evolution, and Systematics, 661-689.
连结：
Baker, A. C., Starger, C. J., McClanahan, T. R., & Glynn, P. W. (2001). Corals’ adaptive response to climate change. Bulletin of Marine Science, 69, 79-109.
连结：
Berkelmans, R., & Van Oppen, M. J. (2006). The role of zooxanthellae in the thermal tolerance of corals: a ‘nugget of hope’ for coral reefs in an era of climate change. Proceedings of the Royal Society of London B: Biological Sciences, 273(1599), 2305-2312.
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DOI可强化引用精确性、增强学术圈连结，并给予使用者跨平台的良好使用经验，目前在全世界已有超过五千万个对象申请DOI。如想对DOI的使用与概念有进一步了解，请参考（）。