题名

Prunus sunhangii is a new synonym of P. itosakura var. ascendens

DOI

10.6165/tai.2022.67.280

作者

Bao-Huan WU;Hai-Jun YANG;Shi SHI;Fei-Fei LI;Da-Fang CUI

关键词

Cerasus ; China ; cpDNA ; Hunan ; ITS ; Prunus sunhangii ; sequences ; synonym ; taxonomy

期刊名称

TAIWANIA

卷期/出版年月

67卷2期(2022 / 06 / 01)

页次

280 - 284

内容语文

英文

中文摘要

Prunus sunhangii was recently described as an independent species related to P. cerasoides with molecular evidence from ITS and four cpDNA sequences (psbA-trnH, rpS16, trnL-trnF and trnS-trnG). However, while repeating the phylogenetic analysis of P. sunhangii, we found some flaws in the previous analysis, including the extremely long branch of the outgroup and the poor sequence quality, which may affect the reliability of the result. Therefore, a new phylogenetic analysis was performed to verify the identity of P. sunhangii with a new data matrix and morphological comparisons. The results showed that P. sunhangii forms a monophyletic clade with P. itosakura var. ascendens with high support and P. sunhangii is similar with P. itosakura var. ascendens in every morphological aspect. We concluded that P. sunhangii is conspecific with P. itosakura var. ascendens and should be synonymized with the latter species.

主题分类 生物農學 > 植物學
生物農學 > 動物學
生物農學 > 生物環境與多樣性
参考文献
  1. Kato, S., A. Matsumoto, K. Yoshimura, T. Katsuki, K. Iwamoto, T. Kawahara, Y. Mukai, Y. Tsuda, S. Ishio, K, Nakamura, K. Moriwaki, T. Shiroishi, T. Gojobori and H. Yoshimaru. 2014. Origins of Japanese flowering cherry (Prunus subgenus Cerasus) cultivars revealed using nuclear SSR markers. Tree Genet. Genomes 10(3): 477–487.
    連結:
  2. Katoh, K., K. Misawa, K.-I. Kuma and T. Miyata. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30(14): 3059–3066.
    連結:
  3. Lanfear, R., P. B. Frandsen, A. M. Wright, T. Senfeld, and B. Calcott. 2017. PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Mol. Biol. Evol. 34(3): 772–773.
    連結:
  4. Ronquist, F. and J. P. Huelsenbeck. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19(12): 1572–1574.
    連結:
  5. Ronquist, F., M. Teslenko, P. Van Der Mark, D. L. Ayres, A. Darling, S. Höhna, B. Larget, L. Liu, M. A. Suchard and J. P. Huelsenbeck. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst. Biol. 61(3): 539–542.
    連結:
  6. Talavera, G. and J. Castresana. 2007. Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Syst. Biol. 56(4): 564–577.
    連結:
  7. Zhang, X.S., Z.-L. Jiang, Z. Yusupov, M.-H. Zhang, D.-G. Zhang, K. Tojibaev, Y. Meng and T. Deng. 2019. Prunus sunhangii: A new species of Prunus from central China. Plant Divers. 41(1): 19–25.
    連結:
  8. Zhang, D., F.-L. Gao, I. Jakovlić, H. Zou, J. Zhang, W.-X. Li, and G.-T. Wang. 2020. PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies. Mol. Ecol. Resour. 20(1): 348–355.
    連結:
  9. Katsuki, T. 2009. Flowering cherries in Japan. Gakken, Tokyo. 264pp. (In Japanese)
  10. Kuitert, W. 1999. Japanese flowering cherries. Timber Press, Portland, Oregon, USA. 395pp.
  11. Li, C.-L. and B. Bartholomew. 2003. Cerasus. In: Wu, Z.-Y. and P. H. Raven eds., Flora of China, 9: 404–420. Science Press & Missouri Botanical Garden Press, Beijing, China and St. Louis, USA.
  12. Makino, T. 1940. An Illustrated Flora of Nippon, with the Cultivated and Naturalized Plants. Hokuryukan, Tokyo, Japan. 1218pp.
  13. Ohwi, J. 1965. Prunus. In: Meyer F. G. and E. H. Walker eds., Flora of Japan by Jisaburo Ohwi (in English), 541–545. Smithsonian Institution, Washington, USA.
  14. Wang, X.-R. 2000. Studies on classification of the Group of Cerasus subhirtella (Miq.) Sok. and its Usage. J. Nanjing Forest. Univ. (Natural Science Edition) 24: 44–46.
  15. Yu, T.-T. and C.-L. Li. 1986. Cerasus. In: Yu, T.-T. ed., Flora Reipublicae Popularis Sinicae. 38: 41–89. Science Press, Beijing.