题名

重組地衣芽孢桿菌鹼性絲胺酸蛋白酶之特性及其於米蛋白之應用

并列篇名

Characteristics of the Recombinant Alkaline Serine Protease from Bacillus licheniformis and its Application on Rice Proteins

DOI

10.6342/NTU201602302

作者

蘇香萍

关键词

地衣芽孢桿菌 ; 鹼性絲胺酸蛋白酶 ; 枯草桿菌蛋白酶 ; 原胜肽 ; 選殖 ; 米蛋白 ; 蛋白水解 ; Bacillus licheniformis ; alkaline serine protease ; subtilisin ; pro-peptide ; cloning ; rice protein ; protein hydorlysis

期刊名称

國立臺灣大學園藝暨景觀學系學位論文

卷期/出版年月

2016年

学位类别

碩士

导师

許輔

内容语文

繁體中文

中文摘要

微生物鹼性絲胺酸蛋白酶廣泛應用於食品業、洗滌業及飼料業,又以 Bacillus sp. 所產之枯草桿菌蛋白酶最為重要。本研究成功將 Bacillus licheniformis ATCC 14580 之鹼性絲胺酸蛋白酶基因 (apr) 選殖於 Escherichia coli 中,此序列全長為 1,140 bp,具 379 個胺基酸。經胺基酸序列比對後,與 subtilisin Carlsberg 具高度同源性,因此,推測 apr 亦為 pre-pro-mature 之酵素結構。透過選殖去除本身 pre-peptide,為 pro-mature-peptide 之 aprO 及僅含 mature peptide 之 aprM 於表現載體 pET-22b(+),並轉型至 E. coli BL21 (DE3)。依據 SDS-PAGE、Western blot、蛋白酶活性測試及質譜定序之結果,可知 pro-peptide 為蛋白酶形成活性結構之必要片段。將 E. coli BL21 pET-22b-aprO 之粗萃液純化後,可得具有活性且分子量約為 28.4 kDa 之重組蛋白 rHis-aprO。rHis-aprO 之最適溫度及 pH 值為 60℃ 及 pH 10,並於 50℃ 下具熱安定性及中、鹼性環境仍保持穩定活性。rHis-aprO 之蛋白酶活性會受 phenylmethylsulfonyl fluoride 影響而所抑制,判定其為一絲胺酸蛋白酶。另外,rHis-aprO 之活性會被 5 mM Ca2+、Mn2+ 及 Mg2+ 所提升,且於界面活性劑、ethylenediaminetetraacetic acid 及多種有機溶劑中具安定性。rHis-aprO 可水解牛血清白蛋白、酪蛋白、膠原蛋白及米蛋白。且 rHis-aprO 於米蛋白之水解率可達 11%。因此,rHis-aprO 具有應用於生產米蛋白水解物之潛力。

主题分类 生物資源暨農學院 > 園藝暨景觀學系
生物農學 > 農業
参考文献
  1. Acharya, S., Chaudhary, A., 2012. Optimization of fermentation conditions for cellulases production by Bacillus licheniformis MVS1 and Bacillus sp. MVS3 isolated from Indian hot spring. Brazilian Archives of Biology and Technology 55, 497-503.
    連結:
  2. Adler-Nissen, J., 1986. Enzymic hydrolysis of food proteins. Elsevier Applied Science Publishers.
    連結:
  3. Akahoshi, A., Sato, K., Nawa, Y., Nakamura, Y., Ohtsuki, K., 2000. Novel approach for large-scale, biocompatible, and low-cost fractionation of peptides in proteolytic digest of food protein based on the amphoteric nature of peptides. Journal of Agricultural and Food Chemistry 48, 1955-1959.
    連結:
  4. Almog, O., Gallagher, D.T., Ladner, J.E., Strausberg, S., Alexander, P., Bryan, P., Gilliland, G.L., 2002. Structural basis of thermostability analysis of stabilizing mutations in subtilisin BPN′. Journal of Biological Chemistry 277, 27553-27558.
    連結:
  5. Arena, A., Maugeri, T.L., Pavone, B., Iannello, D., Gugliandolo, C., Bisignano, G., 2006. Antiviral and immunoregulatory effect of a novel exopolysaccharide from a marine thermotolerant Bacillus licheniformis. International Immunopharmacology 6, 8-13.
    連結:
  6. Baker, P.J., Numata, K., 2013. Polymerization of peptide polymers for biomaterial applications. InTech Open Access Publisher.
    連結:
  7. Barrett, A.J., Rawlings, N.D., 1995. Families and clans of serine peptidases. Archives of Biochemistry and Biophysics 318, 247-250.
    連結:
  8. Beg, Q.K., Gupta, R., 2003. Purification and characterization of an oxidation-stable, thiol-dependent serine alkaline protease from Bacillus mojavensis. Enzyme and Microbial Technology 32, 294-304.
    連結:
  9. Bera, M.B., Mukherjee, R.K., 1989. Solubility, emulsifying, and foaming properties of rice bran protein concentrates. Journal of Food Science 54, 142-145.
    連結:
  10. Bergmann, M., 1942. A classification of proteolytic enzymes, Advances in Enzymology and Related Areas of Molecular Biology (Eds. Nord, F.F., Werkman, C.H.), 49-68.
    連結:
  11. Chang, Y.C., Kadokura, H., Yoda, K., Yamasaki, M., 1996. Secretion of active subtilisin YaB by a simultaneous expression of separate pre-pro and pre-mature polypeptides in Bacillus subtilis. Biochemical and Biophysical Research Communications 219, 463-468.
    連結:
  12. Charney, J., Tomarelli, R.M., 1947. A colonmetric method for the determination of the proteolytic activity of duodenal juice. Journal of Biological Chemistry 171, 501-505.
    連結:
  13. Cherry, J. R., Fidantsef, A. L., 2003. Directed evolution of industrial enzymes: an update. Current Opinion in Biotechnology 14, 438-443.
    連結:
  14. Choi, N.C., Chang, K.T., Maeng, P.J., Kim, S.H., 2004. Cloning, expression, and fibrin(ogen)olytic properties of a subtilisin DJ-4 gene from Bacillus sp. DJ-4. Federation of European Microbiological Societies Microbiology Letters 236, 325-331.
    連結:
  15. Chrastil, J., 1992. Correlations between the physicochemical and functional properties of rice. Journal of Agricultural and Food Chemistry 40, 1683-1686.
    連結:
  16. Demirhan, E., Apar, D.K., Özbek, B., 2010. Sesame cake protein hydrolysis by alcalase: Effects of process parameters on hydrolysis, solubilisation, and enzyme inactivation. Korean Journal of Chemical Engineering 28, 195-202.
    連結:
  17. Fabian, C., Ju, Y. H., 2011. A review on rice bran protein: its properties and extraction methods. Critical Reviews in Food Science and Nutrition 51, 816-827.
    連結:
  18. Ferrero, M.A., Castro, G.R., Abate, C.M., Baigorí, M.D., Siñeriz, F., 1996. Thermostable alkaline proteases of Bacillus licheniformis MIR 29: isolation, production and characterization. Applied Microbiology and Biotechnology 45, 327-332.
    連結:
  19. Fiocchi, A., Travaini, M., D’Auria, E., Banderali, G., Bernardo, L., Riva, E., 2003. Tolerance to a rice hydrolysate formula in children allergic to cow’s milk and soy. Clinical & Experimental Allergy 33, 1576-1580.
    連結:
  20. Fujiwara, N., Yamamoto, K., 1987. Production of alkaline protease in a low-cost medium by alkalophilic Bacillus sp. and properties of the enzyme. Journal of Fermentation Technology 65, 345-348.
    連結:
  21. Fujiwara, N., Yamamoto, K., Masui, A., 1991. Utilization of a thermostable alkaline protease from an alkalophilic thermophile for the recovery of silver from used X-ray film. Journal of Fermentation and Bioengineering 72, 306-308.
    連結:
  22. George, S., Raju, V., Krishnan, M.R.V., Subramanian, T.V., Jayaraman, K., 1995. Production of protease by Bacillus amyloliquefaciens in solid-state fermentation and its application in the unhairing of hides and skins. Process Biochemistry 30, 457-462.
    連結:
  23. Giese, J., 1994. Proteins as ingredients: types, functions, applications. Food technology.
    連結:
  24. Gomes, D.S., Silva, M.A., Antunes, A.A., Sarubbo, L.A., Salgueiro, A.A., 2012. Protease production by Bacillus licheniformis in the presence of industrial wastes. World Scientific, 674-677.
    連結:
  25. Grob, D., 1946. Proteolytic enzymes I. The control of their activity. The Journal of General Physiology 29, 219-247.
    連結:
  26. Gupta, R., Beg, Q., Khan, S., Chauhan, B., 2002a. An overview on fermentation, downstream processing and properties of microbial alkaline proteases. Applied Microbiology and Biotechnology 60, 381-395.
    連結:
  27. Gupta, R., Beg, Q., Lorenz, P., 2002b. Bacterial alkaline proteases: molecular approaches and industrial applications. Applied Microbiology and Biotechnology 59, 15-32.
    連結:
  28. Hamada, J.S., 2000. Characterization and functional properties of rice bran proteins modified by commercial exoproteases and endoproteases. Journal of Food Science 65, 305-310.
    連結:
  29. Hamada, J.S., 1999. Use of proteases to enhance solubilization of rice bran proteins. Journal of Food Biochemistry 23, 307-321.
    連結:
  30. Hamada, J.S., 1997. Characterization of protein fractions of rice bran to devise effective methods of protein solubilization. Cereal Chemistry Journal 74, 662-668.
    連結:
  31. Hartley, B.S., 1960. Proteolytic Enzymes. Annual Review of Biochemistry 29, 45-72.
    連結:
  32. Hu, Z.X., Khadijeh, H., Frank, J., 1996. Further evidence for the structure of the subtilisin propeptide and for its interactions with mature subtilisin. The Journal of biological chemistry 271, 3375-3384.
    連結:
  33. Hwang, K.J., Choi, K.H., Kim, M.J., Park, C.S., Cha, J., 2007. Purification and characterization of a new fibrinolytic enzyme of Bacillus licheniformis KJ-31, isolated from Korean traditional Jeot-gal. Journal of microbiology and biotechnology 17, 1469-1476.
    連結:
  34. Inouye, M., 1991. Intramolecular chaperone: the role of the pro-peptide in protein folding. Enzyme 45, 314-321.
    連結:
  35. Jacobs, M., Eliasson, M., Uhlén, M., Flock, J.-I., 1985. Cloning, sequencing and expression of subtilisin Carlsberg from Bacillus licheniformis. Nucleic Acids Research 13, 8913-8926.
    連結:
  36. Jannière, L., Bruand, C., Dusko Ehrlich, S., 1990. Structurally stable Bacillus subtilis cloning vectors. Gene 87, 53-61.
    連結:
  37. Joshi, S., Satyanarayana, T., 2013. Characteristics and applications of a recombinant alkaline serine protease from a novel bacterium Bacillus lehensis. Bioresource Technology 131, 76-85.
    連結:
  38. Kalisz, H.M., 1988. Microbial proteinases, in: Enzyme Studies, Advances in Biochemical Engineering/Biotechnology. Springer Berlin Heidelberg, 1-65.
    連結:
  39. Kaneko, R., Koyama, N., Tsai, Y.C., Juang, R.Y., Yoda, K., Yamasaki, M., 1989. Molecular cloning of the structural gene for alkaline elastase YaB, a new subtilisin produced by an alkalophilic Bacillus strain. Journal of Bacteriology 171, 5232-5236.
    連結:
  40. Khan, A.R., James, M.N.G., 1998. Molecular mechanisms for the conversion of zymogens to active proteolytic enzymes. Protein Science 7, 815-836.
    連結:
  41. Kinsella, J.E., Melachouris, N., 1976. Functional properties of proteins in foods: a survey. Critical Reviews in Food Science and Nutrition 7, 219-280.
    連結:
  42. Kirk, O., Borchert, T.V., Fuglsang, C.C., 2002. Industrial enzyme applications. C R C Current Opinion in Biotechnology 13, 345-351.
    連結:
  43. Kumar, C.G., Takagi, H., 1999. Microbial alkaline proteases: from a bioindustrial viewpoint. Biotechnology Advances 17, 561-594.
    連結:
  44. Kurihara, M., Markland, F.S., Smith, E.L., 1972. Subtilisin amylosacchariticus III. Isolation and sequence of the chymotryptic peptides and the complete amino acid sequence. Journal of Biological Chemistry 247, 5619-5631.
    連結:
  45. Langeveld, J.P.M., Wang, J.J., Wiel, D.F.M.V. de, Shih, G.C., Garssen, G.J., Bossers, A., Shih, J.C.H., 2003. Enzymatic degradation of prion protein in brain stem from infected cattle and sheep. Journal of Infectious Diseases 188, 1782-1789.
    連結:
  46. Li, Y., Hu, Z., Jordan, F., Inouye, M., 1995. Functional analysis of the propeptide of subtilisin E as an intramolecular chaperone for protein folding refolding and inhibitory abilities of propeptide mutants. Journal of Biological Chemistry 270, 25127-25132.
    連結:
  47. Maase, F.W.J.L., van Tilburg, R., 1983. The benefit of detergent enzymes under changing washing conditions. Journal of the American Oil Chemists Society 60, 1672-1675.
    連結:
  48. Matsui, T., Matsufuji, H., Seki, E., Osajima, K., Nakashima, M., Osajima, Y., 1993. Inhibition of angiotensin I-converting enzyme by Bacillus licheniformis alkaline protease hydrolyzates derived from sardine muscle. Bioscience, Biotechnology, and Biochemistry 57, 922-925.
    連結:
  49. Mohapatra, B.R., Bapuji, M., Sree, A., 2003. Production of industrial enzymes (amylase, carboxymethylcellulase and protease) by bacteria isolated from marine sedentary organisms. Acta Biotechnologica 23, 75-84.
    連結:
  50. Moon, S.-H., Parulekar, S.J., 1991. A parametric study ot protease production in batch and fed-batch cultures of Bacillus firmus. Biotechnology and Bioengineering 37, 467-483.
    連結:
  51. Morihara, K., 1974. Comparative specificity of microbial proteinases, in: Meister, A. (Ed.), Advances in Enzymology and Related Areas of Molecular Biology. John Wiley & Sons, Inc., 179-243.
    連結:
  52. Nadeem, M., Qazi, J.I., Syed, Q., Gulsher, M., 2013. Purification and characterization of an alkaline protease from Bacillus licheniformis UV-9 for detergent formulations. Songklanakarin Journal of Science & Technology 35, 187-195.
    連結:
  53. Nakamura, T., Yamagata, Y., Ichishima, E., 1992. Nucleotide sequence of the subtilisin NAT gene, aprN, of Bacillus subtilis (natto). Bioscience, Biotechnology, and Biochemistry 56, 1869-1871.
    連結:
  54. Nguyen, T.T., Quyen, T.D., Le, H.T., 2013. Cloning and enhancing production of a detergent- and organic-solvent-resistant nattokinase from Bacillus subtilis VTCC-DVN-12-01 by using an eight-protease-gene-deficient Bacillus subtilis WB800. Microbial Cell Factories 12, 79.
    連結:
  55. Nielsen, P. m., Petersen, D., Dambmann, C., 2001. Improved method for determining food protein degree of hydrolysis. Journal of Food Science 66, 642-646.
    連結:
  56. Ohta, Y., Inouye, M., 1990. Pro-subtilisin E: purification and characterization of its autoprocessing to active subtilisin E in vitro. Molecular Microbiology 4, 295-304.
    連結:
  57. Otterburn, M., Healy, M., Sinclair, W., 1977. The formation, isolation and importance of isopeptides in heated proteins, in: Friedman, M. (Ed.), Protein Crosslinking, Advances in Experimental Medicine and Biology. Springer US, 239-262.
    連結:
  58. Paliwal, N., Singh, S.P., Garg, S.K., 1994. Cation-induced thermal stability of an alkaline protease from a Bacillus sp. Bioresource Technology 50, 209-211.
    連結:
  59. Pan, J., Huang, Q., Zhang, Y., 2004. Gene cloning and expression of an alkaline serine protease with dehairing function from Bacillus pumilus. Current Microbiology 49, 165-169.
    連結:
  60. Panyam, D., Kilara, A., 1996. Enhancing the functionality of food proteins by enzymatic modification. Trends in Food Science & Technology 7, 120-125.
    連結:
  61. Paraman, I., Hettiarachchy, N.S., Schaefer, C., 2008. Preparation of rice endosperm protein isolate by alkali extraction. Cereal Chemistry Journal 85, 76-81.
    連結:
  62. Paraman, I., Hettiarachchy, N.S., Schaefer, C., Beck, M.I., 2007. Hydrophobicity, solubility, and emulsifying properties of enzyme-modified rice endosperm protein. Cereal Chemistry Journal 84, 343-349.
    連結:
  63. Park, C.H., Lee, S.J., Lee, S.G., Lee, W.S., Byun, S.M., 2004. Hetero- and autoprocessing of the extracellular metalloprotease (Mpr) in Bacillus subtilis. Journal of Bacteriology 186, 6457-6464.
    連結:
  64. Peng, Y., Huang, Q., Zhang, R., Zhang, Y., 2003. Purification and characterization of a fibrinolytic enzyme produced by Bacillus amyloliquefaciens DC-4 screened from douchi, a traditional Chinese soybean food. Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology 134, 45-52.
    連結:
  65. Perona, J.J., Craik, C.S., 1995. Structural basis of substrate specificity in the serine proteases. Protein Science: A Publication of the Protein Society 4, 337-360.
    連結:
  66. Petersen, T. N., Brunak, S., von Heijne, G., & Nielsen, H., 2011. SignalP 4.0: discriminating signal peptides from transmembrane regions. Nature methods 8, 785-786.
    連結:
  67. Pihlanto-Leppälä, A., 2000. Bioactive peptides derived from bovine whey proteins: opioid and ACE-inhibitory peptides. Trends in Food Science & Technology 11, 347-356.
    連結:
  68. Porres, J.M., Benito, M.J., Lei, X.G., 2002. Functional expression of keratinase (kerA) gene from Bacillus licheniformis in Pichia pastoris. Biotechnology Letters 24, 631-636.
    連結:
  69. Prakash, J., Ramaswamy, D.H.S., 1996. Rice bran proteins: properties and food uses. Critical Reviews in Food Science and Nutrition 36, 537-552.
    連結:
  70. Priest, F.G., 1989. Products and Applications, in: Harwood, C.R. (Ed.), Bacillus, Biotechnology Handbooks. Springer US, 293-320.
    連結:
  71. Pushpam, P.L., Rajesh, T., Gunasekaran, P., 2011. Identification and characterization of alkaline serine protease from goat skin surface metagenome. AMB Express 1, 1.
    連結:
  72. Radha, S., Gunasekaran, P., 2009. Purification and characterization of keratinase from recombinant Pichia and Bacillus strains. Protein Expression and Purification 64, 24-31.
    連結:
  73. Riffel, A., Brandelli, A., 2002. Isolation and characterization of a feather-degrading bacterium from the poultry processing industry. Journal of Industrial Microbiology and Biotechnology 29, 255-258.
    連結:
  74. Rosano, G.L., Ceccarelli, E.A., 2014. Recombinant protein expression in Escherichia coli: advances and challenges. Frontiers in Microbiology 5, 1-17.
    連結:
  75. Sayre, R.N., Earl, L., Kratzer, F.H., Saunders, R.M., 1987. Nutritional qualities of stabilized and raw rice bran for chicks. Poultry Science 66, 493-499.
    連結:
  76. Schallmey, M., Singh, A., Ward, O.P., 2004. Developments in the use of Bacillus species for industrial production. Canadian Journal of Microbiology 50, 1-17.
    連結:
  77. Shewry, P.R., Casey, R. (Eds.), 1999. Seed proteins. Springer Netherlands.
    連結:
  78. Shewry, P.R., Halford, N.G., 2002. Cereal seed storage proteins: structures, properties and role in grain utilization. Journal of Experimental Botany 53, 947-958.
    連結:
  79. Shih, F.F., 2003. An update on the processing of high-protein rice products. Food/Nahrung 47, 420-424.
    連結:
  80. Shih, F.F., Champagne, E.T., Daigle, K., Zarins, Z., 1999. Use of enzymes in the processing of protein products from rice bran and rice flour. Food/Nahrung 43, 14-18.
    連結:
  81. Shih, F.F., Daigle, K.W., 2000. Preparation and characterization of rice protein isolates. Journal of the American Oil Chemists’ Society 77, 885-889.
    連結:
  82. Shinde, U., Inouye, M., 1995. Folding pathway mediated by an intramolecular chaperone: characterization of the structural changes in pro-subtilisin E coincident with autoprocessing. Journal of Molecular Biology 252, 25-30.
    連結:
  83. Shotwell, M.A., Larkins, B.A., 1989. The biochemistry and molecular biology of seed storage proteins. The Biochemistry of plants : a comprehensive treatise.
    連結:
  84. Siezen, R.J., Leunissen, J.A.M., 1997. Subtilases: The superfamily of subtilisin-like serine proteases. Protein Science 6, 501-523.
    連結:
  85. Steven, C., 2014. Global market for industrial enzymes to reach nearly $7.1 billion by 2018; detergent enzyme market to record maximum growth [WWW Document]. http://www.bccresearch.com/pressroom/bio/global-market-industrial-enzymes-reach-nearly-$7.1-billion-2018 (accessed 6.21.16).
    連結:
  86. Sumi, C.D., Yang, B.W., Yeo, I.-C., Hahm, Y.T., 2014. Antimicrobial peptides of the genus Bacillus: a new era for antibiotics. Canadian Journal of Microbiology 61, 93-103.
    連結:
  87. Takagi, H., Kondou, M., Hisatsuka, T., Nakamori, S., Tsai, Y.C., Yamasaki, M., 1992. Effects of an alkaline elastase from an alkalophilic Bacillus strain on the tenderization of beef meat. Journal of Agricultural and Food Chemistry 40, 2364-2368.
    連結:
  88. Takahashi, M., Sekine, T., Kuba, N., Nakamori, S., Yasuda, M., Takagi, H., 2004. The production of recombinant APRP, an alkaline protease derived from Bacillus pumilus TYO-67, by In vitro refolding of pro-enzyme fixed on a solid surface. Journal of Biochemistry 136, 549-556.
    連結:
  89. Tecson, E.M.S., Esmama, B.V., Lontok, L.P., Juliano, B.O., 1971. Studies on the extraction and composition of rice endosperm glutelin and prolamin. Cereal chemistry.
    連結:
  90. Tiwary, E., Gupta, R., 2010. Medium optimization for a novel 58 kDa dimeric keratinase from Bacillus licheniformis ER-15: biochemical characterization and application in feather degradation and dehairing of hides. Bioresource Technology 101, 6103-6110.
    連結:
  91. Vallee, B.L., Ulmer, D.D., 1972. Biochemical effects of mercury, cadmium, and lead. Annual Review of Biochemistry 41, 91-128.
    連結:
  92. Wang, J.J., Swaisgood, H.E., Shih, J.C.H., 2003. Bioimmobilization of keratinase using Bacillus subtilis and Escherichia coli systems. Biotechnology and Bioengineering 81, 421-429.
    連結:
  93. Wang, M., Hettiarachchy, N.S., Qi, M., Burks, W., Siebenmorgen, T., 1999. Preparation and functional properties of rice bran protein isolate. Journal of Agricultural and Food Chemistry 47, 411-416.
    連結:
  94. Ward, O.P., Rao, M.B., Kulkarni, A., 2009. Protease, production. Encyclopedia of Microbiology. 495-511.
    連結:
  95. Webb, E.C., 1992. Enzyme nomenclature 1992. Recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology on the Nomenclature and Classification of Enzymes.
    連結:
  96. Wells, J.A., Ferrari, E., Henner, D.J., Estell, D.A., Chen, E.Y., 1983. Cloning, sequencing, and secretion of Bacillus amyloliquefaciens subtillisin in Bacillus subtilis. Nucleic Acids Research 11, 7911-7925.
    連結:
  97. Williams, C. M., Richter, C. S., MacKenzie, J. M., Shih, J. C. H., 1990. Isolation, identification, and characterization of a feather-degrading bacterium. Applied and Environmental Microbiology 56, 1509-1515.
    連結:
  98. Xu, H., & Freitas, M. A., 2007. A mass accuracy sensitive probability based scoring algorithm for database searching of tandem mass spectrometry data. BMCbioinformatics 8, 1.
    連結:
  99. Xu, H., & Freitas, M. A., 2008. Monte carlo simulation-based algorithms for analysis of shotgun proteomic data. Journal of proteome research 7, 2605-2615.
    連結:
  100. Xu, H., Yang, L., & Freitas, M. A., 2008. A robust linear regression based algorithm for automated evaluation of peptide identifications from shotgun proteomics by use of reversed-phase liquid chromatography retention time. BMC bioinformatics 9, 347.
    連結:
  101. Xu, H., Zhang, L., & Freitas, M. A., 2007. Identification and characterization of disulfide bonds in proteins and peptides from tandem MS data by use of the MassMatrix MS/MS search engine. Journal of proteome research 7, 138-144.
    連結:
  102. Yang, T., Zhu, H., Zhou, H., Lin, Q., Li, W., Liu, J., 2012. Rice protein hydrolysate attenuates hydrogen peroxide induced apoptosis of myocardiocytes H9c2 through the Bcl-2/Bax pathway. Food Research International 48, 736-741.
    連結:
  103. Yan, Q. J., Huang, L. H., Sun, Q., Jiang, Z. Q., Wu, X., 2015. Isolation, identification and synthesis of four novel antioxidant peptides from rice residue protein hydrolyzed by multiple proteases. Food Chemistry 179, 290-295.
    連結:
  104. Yoshioka, M., Miwa, T., Horii, H., Takata, M., Yokoyama, T., Nishizawa, K., Watanabe, M., Shinagawa, M., Murayama, Y., 2007. Characterization of a proteolytic enzyme derived from a Bacillus strain that effectively degrades prion protein. Journal of Applied Microbiology 102, 509-515.
    連結:
  105. Yuan, D. B., Yang, X. Q., Tang, C. H., Zheng, Z. X., Wei-Min, Ahmad, I., Yin, S. W., 2009. Physicochemical and functional properties of acidic and basic polypeptides of soy glycinin. Food Research International 42, 700-706.
    連結:
  106. Zhang, H., Yokoyama, W.H., Zhang, H., 2012. Concentration-dependent displacement of cholesterol in micelles by hydrophobic rice bran protein hydrolysates. Journal of the Science of Food and Agriculture 92, 1395-1401.
    連結:
  107. Zhang, J., Zhang, H., Wang, L., Guo, X., Wang, X., Yao, H., 2010. Isolation and identification of antioxidative peptides from rice endosperm protein enzymatic hydrolysate by consecutive chromatography and MALDI-TOF/TOF MS/MS. Food Chemistry 119, 226-234.
    連結:
  108. Zhang, J., Zhang, H., Wang, L., Guo, X., Wang, X., Yao, H., 2009. Antioxidant activities of the rice endosperm protein hydrolysate: identification of the active peptide. European Food Research and Technology 229, 709-719.
    連結:
  109. Zhao, H., Arnold, F.H., 1999. Directed evolution converts subtilisin E into a functional equivalent of thermitase. Protein Engineering 12, 47-53.
    連結:
  110. Zhao, Q., Xiong, H., Selomulya, C., Chen, X. D., Zhong, H., Wang, S., Sun, W., Zhou, Q., 2012. Enzymatic hydrolysis of rice dreg protein: Effects of enzyme type on the functional properties and antioxidant activities of recovered proteins. Food Chemistry 134, 1360-1367.
    連結:
  111. Zhu, L., Chen, J., Tang, X., Xiong, Y.L., 2008. Reducing, radical scavenging, and chelation properties of in vitro digests of alcalase-treated zein hydrolysate. Journal of Agricultural and Food Chemistry 56, 2714-2721.
    連結:
  112. Zhu, X., Ohta, Y., Jordan, F., Inouye, M., 1989. Pro-sequence of subtilisin can guide the refolding of denatured subtilisin in an intermolecular process. Nature 339, 483-484.
    連結:
  113. Andreoli, P., Lenson, P., Simonette, A., Vos, Y., 1988. Bacillus licheniformis as a host for heterologous gene expression. Proceedings of 2nd Netherlands Biotechnology Congress 151-155.
  114. Cagampang, G. B., Cruz, L. J., Espritu, S. G., Santiago, R. G., Juliano, B. O., 1966. Studies on the extraction and composition of rice proteins. Cereal Chemistry 43, 145-155.
  115. Champagne, E.T., Wood, D.F., Juliano, B.O., Bechtel, D.B., 2004. The rice grain and its gross composition, in: RICE: Chemistry and Technology, Grain Science References. American Association of Cereal Chemists, Inc., 77-107.
  116. Chen, L., Houston, D. F., 1970. Solubilization and recovery of protein from defatted rice bran. Cereal chemistry, 72-79.
  117. Choudhary, R. B., Jana, A. K., Jha, M. K., 2004. Enzyme technology applications in leather processing. Indian Journal of Chemical Technology 11, 659-671.
  118. Damodaran, S., 1997. Food proteins and their applications. CRC Press.
  119. Donlon, J., 2007. Subtilisin, in: Polaina, J., MacCabe, A.P. (Eds.), Industrial Enzymes. Springer Netherlands, 197-206.
  120. Food and Agriculture Organization of the United Nationals. 2015. Rice market monitor. volume XVIII issue No. 4. [WWW Document] http://www.fao.org/fileadmin/templates/est/COMM_MARKETS_MONITORING/Rice/Images/RMM/RMM_DEC15_H.pdf. (accessed 6.24.2016).
  121. Harwood, C.R., 2013. Bacillus. Springer Science & Business Media.
  122. Helm, R.M., Burks, A., 1996. Hypoallergenicity of rice protein. Cereal Foods World 41.
  123. Huebner, F.R., Bietz, J.A., Webb, B.D., Juliano, B.O., 1990. Rice cultivar identification by high-performance liquid chromatography of endosperm proteins. Cereal Chemistry 67, 129-135.
  124. Ikemura, H., Takagi, H., Inouye, M., 1987. Requirement of pro-sequence for the production of active subtilisin E in Escherichia coli. Journal of Biological Chemistry 262, 7859-7864.
  125. Juliano, B.O., 1990. Rice grain quality: problems and challenges. Cereal Foods World 35, 245-253.
  126. Juliano, J.B., Aldama, M.J., 1937. Morphology of Oryza sativa Linnaeus. ResearchGate 26, 1-134.
  127. Lahl, W.J., Braun, S.D., 1994. Enzymatic production of protein hydrolysates for food use, in: Food Technology. Presented at the Protein hydrolysates : properties and uses in nutritional products. Symposium, Institute of Food Technologists, 68-71.
  128. Lin, X., Kelemen, D.W., Miller, E.S., Shih, J.C., 1995. Nucleotide sequence and expression of kerA, the gene encoding a keratinolytic protease of Bacillus licheniformis PWD-1. Applied and Environmental Microbiology 61, 1469-1474.
  129. Pathak, A.P., Deshmukh, K.B., 2012. Alkaline protease production, extraction and characterization from alkaliphilic Bacillus licheniformis KBDL4: A Lonar soda lake isolate. Indian Journal of Experimental Biology 50, 569.
  130. Pedersen, H.H., Olsen, H.S., Nielsen, P.M., 1993. Method for production of a meat hydrolyzate and a use of the meat hydrolyzate. PTC International Patent Application WO 94, 003.
  131. Rao, M.B., Tanksale, A.M., Ghatge, M.S., Deshpande, V.V., 1998. Molecular and biotechnological aspects of microbial proteases. Microbiology and Molecular Biology Reviews 62, 597-635.
  132. Rey, M.W., Ramaiya, P., Nelson, B.A., Brody-Karpin, S.D., Zaretsky, E.J., Tang, M., de Leon, A.L., Xiang, H., Gusti, V., Clausen, I.G., Olsen, P.B., Rasmussen, M.D., Andersen, J.T., J?rgensen, P.L., Larsen, T.S., Sorokin, A., Bolotin, A., Lapidus, A., Galleron, N., Ehrlich, S.D., Berka, R.M., 2004. Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species. Genome Biology 5, 1-12.
  133. Sandhya, C., Nampoothiri, K.M., Pandey, A., 2005. Microbial proteases, in: Barredo, J. (Ed.), Microbial Enzymes and Biotransformations, Methods in Biotechnology. Humana Press, 165-179.
  134. Saunders, R.M., 1990. The properties of rice bran as a foodstuff. Cereal Foods World 35, 632-636.
  135. Shahidi, F., Zhong, Y., 2008. Bioactive peptides. Journal of AOAC International 91, 914-931.
  136. Smith, E.L., DeLange, R.J., Evans, W.H., Landon, M., Markland, F.S., 1968. Subtilisin Carlsberg V. The complete sequence; comparison with subtilisin BPN’; evolutionary relationships. Journal of Biological Chemistry 243, 2184-2191.
  137. Takagi, H., Takahashi, T., Momose, H., Inouye, M., Maeda, Y., Matsuzawa, H., Ohta, T., 1990. Enhancement of the thermostability of subtilisin E by introduction of a disulfide bond engineered on the basis of structural comparison with a thermophilic serine protease. Journal of Biological Chemistry 265, 6874-6878.
  138. Taylor, M.M., Bailey, D.G., Feairheller, S.H., 1987. A review of the uses of enzymes in the tannery. The Journal of the American Leather Chemists Association.
  139. Vasantha, N., Thompson, L.D., Rhodes, C., Banner, C., Nagle, J., Filpula, D., 1984. Genes for alkaline protease and neutral protease from Bacillus amyloliquefaciens contain a large open reading frame between the regions coding for signal sequence and mature protein. Journal of Bacteriology 159, 811-819.
  140. Veith, B., Herzberg, C., Steckel, S., Feesche, J., Maurer, K.H., Ehrenreich, P., Bäumer, S., Henne, A., Liesegang, H., Merkl, R., Ehrenreich, A., Gottschalk, G., 2004. The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential. Journal of Molecular Microbiology and Biotechnology 7, 204-211.
  141. Wells, J.A., Powers, D.B., 1986. In vivo formation and stability of engineered disulfide bonds in subtilisin. Journal of Biological Chemistry 261, 6564-6570.
  142. Wong, D.W.S., 2009. Food Enzymes: Structure and Mechanism. Springer Science & Business Media.